我需要几个包来运行Rstudio rmd来创建标记。这些被保存在conda环境中。在conda环境中打开Rstudio会给我一个错误,但在它之外打开Rstudio则不会。我知道有一种方法可以直接用一些包来指定conda环境,比如用网纹,但是
有没有一种方法可以打开Rstudio并指向conda环境,这样我的特定版本的R和所有依赖项都可以使用?
如果你想知道在环境中启动rstudio时出错,我尝试过卸载并重新安装rstudio,删除~/.local/share/rstudio和~/.config/rstudio文件夹。但是,运气不好。以下是错误消息:
unable to initialize the JIT
/home/tjm/.local/share/rstudio/log/rsession-tjm.log
:
2023-04-05T06:11:57.805471Z [rsession-tjm] ERROR R SUICIDE: unable to initialize the JIT; LOGGED FROM: void {anonymous}::rSuicide(const string&) src/cpp/session/SessionMain.cpp:1241
2023-04-05T06:25:08.469411Z [rsession-tjm] ERROR R SUICIDE: unable to initialize the JIT; LOGGED FROM: void {anonymous}::rSuicide(const string&) src/cpp/session/SessionMain.cpp:1241
2023-04-05T06:25:08.469411Z [rsession-tjm] ERROR R SUICIDE: unable to initialize the JIT; LOGGED FROM: void {anonymous}::rSuicide(const string&) src/cpp/session/SessionMain.cpp:1241
编辑:以下是一些关于启动Rstudio失败以及从网纹导入失败的conda环境的信息。
环境1:
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_gnu conda-forge
_r-mutex 1.0.1 anacondar_1 conda-forge
binutils_impl_linux-64 2.40 hf600244_0 conda-forge
bwidget 1.9.14 ha770c72_1 conda-forge
bzip2 1.0.8 h7f98852_4 conda-forge
c-ares 1.19.0 h5eee18b_0
ca-certificates 2023.01.10 h06a4308_0 anaconda
cairo 1.16.0 ha61ee94_1014 conda-forge
curl 7.88.1 h5eee18b_0
expat 2.5.0 hcb278e6_1 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.14.2 h14ed4e7_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
freetype 2.12.1 hca18f0e_1 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
gcc_impl_linux-64 12.2.0 hcc96c02_19 conda-forge
gettext 0.21.1 h27087fc_0 conda-forge
gfortran_impl_linux-64 12.2.0 h55be85b_19 conda-forge
graphite2 1.3.14 h295c915_1
gsl 2.7.1 h6e86dc7_1
gxx_impl_linux-64 12.2.0 hcc96c02_19 conda-forge
harfbuzz 6.0.0 h8e241bc_0 conda-forge
icu 70.1 h27087fc_0 conda-forge
jpeg 9e h0b41bf4_3 conda-forge
kernel-headers_linux-64 2.6.32 he073ed8_15 conda-forge
krb5 1.19.4 h568e23c_0
ld_impl_linux-64 2.40 h41732ed_0 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libblas 3.9.0 16_linux64_openblas conda-forge
libcurl 7.88.1 h91b91d3_0
libdeflate 1.14 h166bdaf_0 conda-forge
libedit 3.1.20221030 h5eee18b_0
libev 4.33 h516909a_1 conda-forge
libexpat 2.5.0 hcb278e6_1 conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libgcc-devel_linux-64 12.2.0 h3b97bd3_19 conda-forge
libgcc-ng 12.2.0 h65d4601_19 conda-forge
libgfortran-ng 12.2.0 h69a702a_19 conda-forge
libgfortran5 12.2.0 h337968e_19 conda-forge
libglib 2.74.1 h606061b_1 conda-forge
libgomp 12.2.0 h65d4601_19 conda-forge
libiconv 1.17 h166bdaf_0 conda-forge
liblapack 3.9.0 16_linux64_openblas conda-forge
libnghttp2 1.46.0 hce63b2e_0
libopenblas 0.3.21 pthreads_h78a6416_3 conda-forge
libpng 1.6.39 h753d276_0 conda-forge
libsanitizer 12.2.0 h46fd767_19 conda-forge
libssh2 1.10.0 haa6b8db_3 conda-forge
libstdcxx-devel_linux-64 12.2.0 h3b97bd3_19 conda-forge
libstdcxx-ng 12.2.0 h46fd767_19 conda-forge
libtiff 4.4.0 h82bc61c_5 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libwebp-base 1.3.0 h0b41bf4_0 conda-forge
libxcb 1.13 h7f98852_1004 conda-forge
libxml2 2.10.3 hca2bb57_4 conda-forge
libzlib 1.2.13 h166bdaf_4 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
make 4.3 hd18ef5c_1 conda-forge
ncurses 6.4 h6a678d5_0
openssl 1.1.1t h0b41bf4_0 conda-forge
pango 1.50.14 hd33c08f_0 conda-forge
pcre2 10.40 hc3806b6_0 conda-forge
pip 23.0.1 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 h36c2ea0_0 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
python 3.9.16 h7a1cb2a_0 anaconda
r-base 4.0.5 hb87df5d_8 conda-forge
readline 8.2 h8228510_1 conda-forge
sed 4.8 he412f7d_0 conda-forge
setuptools 67.6.1 pyhd8ed1ab_0 conda-forge
sqlite 3.41.1 h5eee18b_0
sysroot_linux-64 2.12 he073ed8_15 conda-forge
tk 8.6.12 h27826a3_0 conda-forge
tktable 2.10 hb7b940f_3 conda-forge
tzdata 2023c h71feb2d_0 conda-forge
wheel 0.40.0 pyhd8ed1ab_0 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.0.10 h7f98852_0 conda-forge
xorg-libsm 1.2.3 hd9c2040_1000 conda-forge
xorg-libx11 1.8.4 h0b41bf4_0 conda-forge
xorg-libxau 1.0.9 h7f98852_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.10 h7f98852_1003 conda-forge
xorg-libxt 1.2.1 h7f98852_2 conda-forge
xorg-renderproto 0.11.1 h7f98852_1002 conda-forge
xorg-xextproto 7.3.0 h0b41bf4_1003 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xz 5.2.10 h5eee18b_1
zlib 1.2.13 h166bdaf_4 conda-forge
zstd 1.5.4 hc292b87_0
