未能预编译StatsPlots.jl

这可能连接到 this 或 this 。然而,建议的解决方案都不适合我。

我正在使用带有Julia扩展的VSCode,我在Jupyter笔记本上运行所有内容。我的第一个单元格如下。

using Distributions
using StatsBase
using CSV
using DataFrames
using HypothesisTests
using Plots
using GLM
using StatsPlots

执行单元格会产生以下错误。

ailed to precompile StatsPlots [f3b207a7-027a-5e70-b257-86293d7955fd] to /home/david/.julia/compiled/v1.7/StatsPlots/jl_27z7QU.

Stacktrace:
  [1] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, ignore_loaded_modules::Bool)
    @ Base ./loading.jl:1466
  [2] compilecache(pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1410
  [3] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1120
  [4] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:1013
  [5] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:997
  [6] eval
    @ ./boot.jl:373 [inlined]
  [7] include_string(mapexpr::typeof(REPL.softscope), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:1196
  [8] #invokelatest#2
    @ ./essentials.jl:716 [inlined]
  [9] invokelatest
    @ ./essentials.jl:714 [inlined]
 [10] (::VSCodeServer.var"#150#151"{VSCodeServer.NotebookRunCellArguments, String})()
    @ VSCodeServer ~/.vscode/extensions/julialang.language-julia-1.5.11/scripts/packages/VSCodeServer/src/serve_notebook.jl:18
 [11] withpath(f::VSCodeServer.var"#150#151"{VSCodeServer.NotebookRunCellArguments, String}, path::String)
    @ VSCodeServer ~/.vscode/extensions/julialang.language-julia-1.5.11/scripts/packages/VSCodeServer/src/repl.jl:185
 [12] notebook_runcell_request(conn::VSCodeServer.JSONRPC.JSONRPCEndpoint{Base.PipeEndpoint, Base.PipeEndpoint}, params::VSCodeServer.NotebookRunCellArguments)
    @ VSCodeServer ~/.vscode/extensions/julialang.language-julia-1.5.11/scripts/packages/VSCodeServer/src/serve_notebook.jl:14
 [13] dispatch_msg(x::VSCodeServer.JSONRPC.JSONRPCEndpoint{Base.PipeEndpoint, Base.PipeEndpoint}, dispatcher::VSCodeServer.JSONRPC.MsgDispatcher, msg::Dict{String, Any})
    @ VSCodeServer.JSONRPC ~/.vscode/extensions/julialang.language-julia-1.5.11/scripts/packages/JSONRPC/src/typed.jl:67
 [14] serve_notebook(pipename::String; crashreporting_pipename::String)
    @ VSCodeServer ~/.vscode/extensions/julialang.language-julia-1.5.11/scripts/packages/VSCodeServer/src/serve_notebook.jl:94
 [15] top-level scope
    @ ~/.vscode/extensions/julialang.language-julia-1.5.11/scripts/notebook/notebook.jl:12

接下来,我打开了Julia命令行,并使用 ] rm "StatsPlots" 并使用 ] add "StatsPlots" 没有成功。我试着执行 precompile 在命令行中手动操作,生成以下输出。

(@v1.7) pkg> precompile
Precompiling project...
  ✗ Arpack
  ✗ MultivariateStats
  ✗ StatsPlots
  0 dependencies successfully precompiled in 11 seconds (216 already precompiled)

ERROR: The following 1 direct dependency failed to precompile:

StatsPlots [f3b207a7-027a-5e70-b257-86293d7955fd]

Failed to precompile StatsPlots [f3b207a7-027a-5e70-b257-86293d7955fd] to /home/david/.julia/compiled/v1.7/StatsPlots/jl_1XjxNk.
ERROR: LoadError: InitError: could not load library "/home/david/.julia/artifacts/cdf6dc8aa6771a61c6c65a5a5c1a8d1b75f50a2f/lib/libarpack.so"
libopenblas64_.so: cannot open shared object file: No such file or directory
Stacktrace:
 [1] macro expansion
   @ ~/.julia/packages/JLLWrappers/QpMQW/src/products/library_generators.jl:54 [inlined]
 [2] __init__()
   @ Arpack_jll ~/.julia/packages/Arpack_jll/zfgpQ/src/wrappers/x86_64-linux-gnu-libgfortran5.jl:10
 [3] top-level scope (repeats 2 times)
   @ none:1
during initialization of module Arpack_jll
in expression starting at /home/david/.julia/packages/Arpack/pLziT/src/Arpack.jl:2
ERROR: LoadError: Failed to precompile Arpack [7d9fca2a-8960-54d3-9f78-7d1dccf2cb97] to /home/david/.julia/compiled/v1.7/Arpack/jl_fCy8AR.
Stacktrace:
 [1] include(x::String)
   @ MultivariateStats ~/.julia/packages/MultivariateStats/zLpz8/src/MultivariateStats.jl:1
 [2] top-level scope
   @ ~/.julia/packages/MultivariateStats/zLpz8/src/MultivariateStats.jl:113
 [3] top-level scope (repeats 2 times)
   @ none:1
in expression starting at /home/david/.julia/packages/MultivariateStats/zLpz8/src/kpca.jl:3
in expression starting at /home/david/.julia/packages/MultivariateStats/zLpz8/src/MultivariateStats.jl:1
ERROR: LoadError: Failed to precompile MultivariateStats [6f286f6a-111f-5878-ab1e-185364afe411] to /home/david/.julia/compiled/v1.7/MultivariateStats/jl_8Rrih5.
Stacktrace:
 [1] top-level scope (repeats 2 times)
   @ none:1
in expression starting at /home/david/.julia/packages/StatsPlots/CpWiU/src/StatsPlots.jl:1

我尝试重新启动Julia内核,重新启动VSCode,并尝试了我提供的第二个链接中建议的解决方案,即删除包并运行 gc 。

我也删除并重新阅读 MultivariateStats 和 Arpack 但是上述误差仍然存在。

这可能是出于兴趣,它以前也起过作用。我首先在执行以下单元格时遇到了另一个错误。

@df data density(:Age, group = :Treatment, title = "Distribution of ages by treatment group", xlab = "Age", ylab="Distribution", legend=:topright)

以上操作导致以下错误消息。

LoadError: UndefVarError: @df not defined

可能是我不小心添加了过时的扩展 StatPlots 这可能导致了上述问题。但是,我已经删除了旧的扩展并添加了新的扩展。

如何解决上述问题?

编辑: 跑步 Pkg.status() 产生以下输出。

(@v1.7) pkg> status
      Status `~/.julia/environments/v1.7/Project.toml`
  [336ed68f] CSV v0.10.2
  [8f4d0f93] Conda v1.6.0
  [a93c6f00] DataFrames v1.3.2
  [31c24e10] Distributions v0.25.48
  [38e38edf] GLM v1.6.1
  [a2cc645c] GraphPlot v0.5.0
  [86223c79] Graphs v1.6.0
  [09f84164] HypothesisTests v0.10.6
  [7073ff75] IJulia v1.23.2
  [91a5bcdd] Plots v1.25.8
  [c3e4b0f8] Pluto v0.18.0
  [7f904dfe] PlutoUI v0.7.23
  [438e738f] PyCall v1.93.0
  [d330b81b] PyPlot v2.10.0
  [aa4a32ff] SimpleHypergraphs v0.2.0
  [2913bbd2] StatsBase v0.33.14
  [f3b207a7] StatsPlots v0.14.33