我尝试在Jupyter笔记本电脑中安装Cran软件包(从镜子中),通过Jupyterlab启动,运行在AlpineLinuxDocker映像中,大多数软件都是使用Conda安装的。一些程序包工作…
install.packages('ABCanalysis', verbose=TRUE, INSTALL_opts=c('--debug'), repos=...)
…哪些输出…
system (cmd0): /opt/conda/lib/R/bin/R CMD INSTALL
also installing the dependency 'plotrix'
foundpkgs: plotrix, ABCanalysis, /tmp/RtmpqoorrU/downloaded_packages/plotrix_3.7-4.tar.gz, /tmp/RtmpqoorrU/downloaded_packages/ABCanalysis_1.2.1.tar.gz
files: /tmp/RtmpqoorrU/downloaded_packages/plotrix_3.7-4.tar.gz,
/tmp/RtmpqoorrU/downloaded_packages/ABCanalysis_1.2.1.tar.gz
1): succeeded '/opt/conda/lib/R/bin/R CMD INSTALL --debug -l '/opt/conda/lib/R/library' /tmp/RtmpqoorrU/downloaded_packages/plotrix_3.7-4.tar.gz'
2): succeeded '/opt/conda/lib/R/bin/R CMD INSTALL --debug -l '/opt/conda/lib/R/library' /tmp/RtmpqoorrU/downloaded_packages/ABCanalysis_1.2.1.tar.gz'
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
install.packages('bitops', verbose=TRUE, INSTALL_opts=c('--debug'), repos=...)
…但有些包裹不…
install.packages('bitops', verbose=TRUE, INSTALL_opts=c('--debug'), repos=...)
system (cmd0): /opt/conda/lib/R/bin/R CMD INSTALL
foundpkgs: bitops, /tmp/RtmpqoorrU/downloaded_packages/bitops_1.0-6.tar.gz
files: /tmp/RtmpqoorrU/downloaded_packages/bitops_1.0-6.tar.gz
Warning message in install.packages("bitops", verbose = TRUE, INSTALL_opts = c("--debug"), :
"installation of package 'bitops' had non-zero exit status"Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
我怀疑,但不确定,那些不需要编译工作的包,以及那些需要编译工作的包。
如何调试,即如何发现导致非零退出代码的原因?两个
--debug
和
verbose
不要透露任何有用的信息。